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PopABC: a program to infer historical demographic parameters

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Lopes, J. S., Balding, D. and Beaumont, M. A. (2009) PopABC: a program to infer historical demographic parameters. Bioinformatics, 25 (20). pp. 2747-2749. ISSN 1367-4803 doi: 10.1093/bioinformatics/btp487

Abstract/Summary

PopABC is a computer package for inferring the pattern of demographic divergence of closely related populations and species. The software performs coalescent simulation in the framework of approximate Bayesian computation (ABC). PopABC can also be used to perform Bayesian model choice to discriminate between different demographic scenarios. The program can be used either for research or for education and teaching purposes.

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Item Type Article
URI https://reading-clone.eprints-hosting.org/id/eprint/9642
Identification Number/DOI 10.1093/bioinformatics/btp487
Refereed Yes
Divisions Life Sciences > School of Biological Sciences
Uncontrolled Keywords APPROXIMATE BAYESIAN COMPUTATION, CHAIN MONTE-CARLO, POPULATION-GENETICS, FINITE POPULATION, MODEL, LIKELIHOODS, DIVERGENCE, MIGRATION, MUTATIONS, SIMCOAL
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