High performance subgraph mining in molecular compounds

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1. Washio, T., Motoda, H.: State of the art of graph-based data mining. ACM SIGKDD Explorations Newsletter 5 (2003) 59–68 2. Agrawal, R., Imielinski, T., Swami, A.N.: Mining association rules between sets of items in large databases. In: Proceedings of the 1993 ACM SIGMOD International Conference on Management of Data, (Washington, D.C.) 3. Zaki, M., Parthasarathy, S., Ogihara, M., Li,W.: New algorithms for fast discovery of association rules. In: Proceedings of 3rd Int. Conf. on Knowledge Discovery and Data Mining (KDD’97). (1997) 283–296 4. Deshpande, M., Kuramochi, M., Karypis, G.: Frequent sub-structure-based approaches for classifying chemical compounds. In: Proceedings of IEEE International Conference on Data Mining (ICDM’03), Melbourne, Florida, USA (2003) 5. Deshpande, M., Kuramochi, M., Karypis, G.: Automated approaches for classifying structures. In: Proceedings of Workshop on Data Mining in Bioinformatics (BioKDD). (2002) 11–18 6. Yan, X., Han, J.: gSpan: Graph-Based Substructure Pattern Mining. In: Proc. of the IEEE Int. Conference on Data Mining, Maebashi City, Japan (2002) 7. Borgelt, C., Berthold, M.R.: Mining molecular fragments: Finding relevant substructures of molecules. In: IEEE International Conference on Data Mining (ICDM 2002), Maebashi, Japan (2002) 51–58 8. Kramer, S., de Raedt, L., Helma, C.: Molecular feature mining in hiv data. In: Proceedings of 7th Int. Conf. on Knowledge Discovery and Data Mining, (KDD’01), San Francisco, CA (2001) 136–143 9. Zaki, M.J.: Parallel and distributed association mining: A survey. IEEE Concurrency 7 (1999) 14–25 10. Di Fatta, G., Berthold, M.R.: Distributed mining of molecular fragments. In: IEEE DM-Grid Workshop of the Int. Conf. on Data Mining, Brighton, UK (2004) 11. Wang, C., Parthasarathy, S.: Parallel algorithms for mining frequent structural motifs in scientific data. In: Proceedings of the 18th Annual International Conference on Supercomputing (ICS’04), Saint Malo, France (2004) 12. Finkel, R., Manber, U.: DIB - a distributed implementation of backtracking. ACM Transactions on Programming Languages and Systems 9 (2) (1987) 235–256 13. Daylight Chemical Information Systems, Inc.: SMILES - Simplified Molecular Input Line Entry Specification. (In: http://www.daylight.com/smiles) 14. Karp, R., Zhang, Y.: A randomized parallel branch-and-bound procedure. In: Proceedings of the 20 Annual ACM Symposium on Theory of Computing (STOC 1988). (1988) 290–300 15. Chakrabarti, S., Ranade, A., Yelick, K.: Randomized load-balancing for treestructured computation. In: Proceedings of the Scalable High Performance Computing Conference (SHPCC ’94), Knoxville, TN (1994) 666–673 16. Chung, Y., Park, J., Yoon, S.: An asynchronous algorithm for balancing unpredictable workload on distributed-memory machines. ETRI Journal 20 (1998) 346– 360 17. Weislow, O., Kiser, R., Fine, D., Bader, J., Shoemaker, R., Boyd, M.: New soluble formazan assay for hiv-1 cytopathic effects: Application to high flux screening of synthetic and natural products for aids antiviral activity. Journal of the National Cancer Institute, University Press, Oxford, UK, 81 (1989) 577–586